Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCGCTGCGTCTCATTGTGAGCCGCGGG
.((((((.(((((((.((((..&.))))))))))).)))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_173477
GeneSymbolUSH1G
Binding site317,347
Score0.846
Seed1
Au0.353
Energy-20.6
Binding len21
Me-6.34
Phylopstem1.3345417857142858
Phylopflank1.6007119100000002
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end5
PositionCDS
2D Structure