Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCGGAGCTGGAAAGCCGGG
..((((((((.((((((((...&))))))))..)))..))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173477
GeneSymbolUSH1G
Binding site2164,2185
Score0.846
Seed1
Au0.338
Energy-23.7
Binding len21
Me-7.782
Phylopstem0.22921628125000001
Phylopflank0.321247546875
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end5
Position3UTR
2D Structure