Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGCAGTGCCAACAGCCTGCAGGACCGCAGCTGTGGG
((((((((((((((.(.((((&.))))..).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173477
GeneSymbolUSH1G
Binding site1248,1289
Score0.923
Seed1
Au0.353
Energy-29.1
Binding len24
Me-4.673
Phylopstem0.052185157142857146
Phylopflank0.040722151250000005
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure