Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCAACCTCAGCTGA
...((((((.(((((...(((&))).))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001349273
GeneSymbolTMCC1
Binding site3626,3643
Score0.846
Seed0
Au0.485
Energy-20.2
Binding len17
Me-7.99
Phylopstem1.0826931666666668
Phylopflank1.38592910125
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure