Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTTGGGAGCCTCAGCTGCC
..(((((((.((((.(((((.&))))...).)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173483
GeneSymbolCYP4F22
Binding site517,539
Score0.846
Seed1
Au0.456
Energy-21.7
Binding len22
Me-6.935
Phylopstem1.355952857142857
Phylopflank0.86747732375
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure