Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTGTGCGAGGG
.(((.(((((((..........&))))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_173485
GeneSymbolTSHZ2
Binding site54,66
Score1.0
Seed0
Au0.441
Energy-16.8
Binding len12
Me-11.027
Phylopstem-0.5608271428571429
Phylopflank-0.2566975865
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end0
Position5UTR
2D Structure