Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGCAACCGTGCATGTCACTGCCGAGGGATGGCTGCT
..((((((((((((((.((((&)))).))))))))....................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173485
GeneSymbolTSHZ2
Binding site6631,6671
Score0.923
Seed1
Au0.456
Energy-24.9
Binding len40
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings27
Pairings in 3prime end7
Position3UTR
2D Structure