Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGCATTAAAGAAGGATTAATAACTGCAGATGCAGA
(((((.((((((((((.....&.)))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173488
GeneSymbolSLCO6A1
Binding site1798,1836
Score0.846
Seed0
Au0.603
Energy-20.3
Binding len18
Me-5.839
Phylopstem5.6593082
Phylopflank6.2259817912500015
Longest consecutive pairings10
Position of longest consecutive pairings7
Pairings in 3prime end3
PositionCDS
2D Structure