Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTCCTGGACATGTCTCCTGCAGCTGCTGCTGA
...((((.((((((((.(((.&.))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173490
GeneSymbolTMEM171
Binding site177,213
Score1.0
Seed0
Au0.353
Energy-22.3
Binding len18
Me-8.828
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end6
Position5UTR
2D Structure