Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTACCGTGTTAGCCAGGC
.((((((..(((..(((((...&)))))..)))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_173491
GeneSymbolLSM11
Binding site4157,4176
Score0.923
Seed1
Au0.529
Energy-17.2
Binding len19
Me-9.309
Phylopstem0.21637338999999997
Phylopflank1.5542253154999999
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure