Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGCACCATTTCCATAGCAGCTGACAAA
((((((((((((.((((((..&)))))))).........))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173491
GeneSymbolLSM11
Binding site5237,5266
Score0.846
Seed1
Au0.662
Energy-20.8
Binding len29
Me-5.227
Phylopstem1.5774158181818179
Phylopflank1.0267742104166666
Longest consecutive pairings8
Position of longest consecutive pairings21
Pairings in 3prime end6
Position3UTR
2D Structure