Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCGCCGGCCGCATCTCCGAGAGGTATGACATCAAAGGCTGCGAG
(((((((((((((((...(((&)))....))))))))........................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173492
GeneSymbolPIP5KL1
Binding site226,273
Score0.923
Seed1
Au0.353
Energy-21.5
Binding len47
Me-4.171
Phylopstem1.0692533897435899
Phylopflank1.6066952024999996
Longest consecutive pairings8
Position of longest consecutive pairings32
Pairings in 3prime end5
PositionCDS
2D Structure