Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTCTGCATGGCCAGGG
.((((((...(.((((((((((&))))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_173493
GeneSymbolPASD1
Binding site2568,2586
Score0.923
Seed1
Au0.353
Energy-20.0
Binding len18
Me-11.753
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure