Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCACAGGAAGGTGGCCT
....((((((((((((((((((&)))))).)))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173493
GeneSymbolPASD1
Binding site2809,2830
Score0.808
Seed0
Au0.544
Energy-27.2
Binding len21
Me-9.547
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end8
Position3UTR
2D Structure