Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCACCGGAGACCACAGGGAGGAGCTTCAAGGTA
.((((((((((((((((((...&.))).))))))))))))....))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173493
GeneSymbolPASD1
Binding site87,122
Score0.897
Seed1
Au0.353
Energy-24.4
Binding len25
Me-3.793
Phylopstem0.4892034260869565
Phylopflank0.44742258499999993
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end5
Position5UTR
2D Structure