Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCGGCAGCTGCGGG
((((((((((.(((((.....&))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173493
GeneSymbolPASD1
Binding site1667,1684
Score0.846
Seed1
Au0.412
Energy-26.0
Binding len17
Me-6.762
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure