Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCAACCAGCAGCAACTGGTGCAGC
(((((((((((((((.(((((&)))))))))).)))))......))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173493
GeneSymbolPASD1
Binding site1617,1645
Score0.846
Seed1
Au0.441
Energy-24.2
Binding len28
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings18
Pairings in 3prime end7
PositionCDS
2D Structure