Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATTACAGCCATCATCACCAGTTGCAT
.((((((((.(((((((((((&))).))))))))........)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173493
GeneSymbolPASD1
Binding site1262,1291
Score0.885
Seed1
Au0.529
Energy-22.2
Binding len29
Me-5.036
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end8
PositionCDS
2D Structure