Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCAACCTCAGCTGA
...((((((.(((((...(((&))).))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001349274
GeneSymbolTMCC1
Binding site3487,3504
Score1.0
Seed0
Au0.485
Energy-20.2
Binding len17
Me-7.99
Phylopstem2.2925750833333334
Phylopflank3.9186416375
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure