Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TATTGAATGCTAGGC
.((((((((.(((((.......&))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_173495
GeneSymbolPTCHD1
Binding site11223,11238
Score0.923
Seed1
Au0.676
Energy-16.1
Binding len15
Me-5.269
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end1
Position3UTR
2D Structure