Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCCCTCCACAGCAGGACCAGGAAAGGAGCCC
....(((((((((((.(((...&.))).))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173495
GeneSymbolPTCHD1
Binding site8252,8284
Score0.923
Seed0
Au0.471
Energy-24.5
Binding len17
Me-9.78
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure