Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTCACCCGCCCCGCTGCT
..(((((.((((.((..((((&))))..)).))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173495
GeneSymbolPTCHD1
Binding site7341,7363
Score0.923
Seed0
Au0.397
Energy-22.5
Binding len22
Me-8.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings5
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure