Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGCTAAAGTGGCTGCAC
.(((((((((....((((((.&))))))....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173495
GeneSymbolPTCHD1
Binding site3983,4003
Score1.0
Seed1
Au0.471
Energy-20.9
Binding len20
Me-12.111
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure