Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGAATAACTGTGGCTGG
...(((((((((((((..(((&)))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173495
GeneSymbolPTCHD1
Binding site7003,7022
Score1.0
Seed0
Au0.529
Energy-20.6
Binding len19
Me-6.515
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure