Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCTCGCGGCCGCGGCGGCAGC
((((.(((((((((((.(((.&)))...))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173497
GeneSymbolHECTD2
Binding site5,28
Score0.846
Seed0
Au0.246
Energy-26.7
Binding len23
Me-8.057
Phylopstem0.36385026363636364
Phylopflank0.10658252750000005
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end6
Position5UTR
2D Structure