Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCCAGAAAGTCTATAATAGAAATAGTAAGCTAT
...(((((.((((((((((((.&))))))))))))..................))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173503
GeneSymbolEFCAB3
Binding site534,570
Score0.846
Seed0
Au0.603
Energy-21.7
Binding len36
Me-7.571
Phylopstem0.45415476666666676
Phylopflank1.352572385
Longest consecutive pairings12
Position of longest consecutive pairings24
Pairings in 3prime end7
PositionCDS
2D Structure