Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACAGGAATTGCTGGGC
.(((((((.....((((((...&)))))).....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_173510
GeneSymbolCCDC117
Binding site3100,3119
Score1.0
Seed1
Au0.574
Energy-17.6
Binding len19
Me-13.553
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure