Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACGGCACGCAGCCAGCAAG
((((.(((((((((((..(((&)))))))).))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173510
GeneSymbolCCDC117
Binding site2091,2113
Score0.923
Seed0
Au0.559
Energy-21.8
Binding len22
Me-8.057
Phylopstem-0.6689037333333333
Phylopflank-0.1818258425
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end6
Position3UTR
2D Structure