Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCTGCGGCTGCC
..((((((((((((.......&)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173510
GeneSymbolCCDC117
Binding site85,98
Score0.808
Seed1
Au0.221
Energy-21.3
Binding len13
Me-5.925
Phylopstem-0.13257883333333334
Phylopflank0.3016765187499999
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end1
Position5UTR
2D Structure