Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTGTGCTGGGTG
(((((((((((...........&))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_173516
GeneSymbolPNLDC1
Binding site1778,1790
Score0.846
Seed1
Au0.441
Energy-17.3
Binding len12
Me-10.399
Phylopstem-0.28863754545454545
Phylopflank0.007968692500000006
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure