Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCAAGTTTGATGTCAGGC
.((((((((.(((((((((...&))))))...))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_173516
GeneSymbolPNLDC1
Binding site1497,1518
Score0.846
Seed1
Au0.559
Energy-19.3
Binding len21
Me-5.036
Phylopstem-0.1716554583333333
Phylopflank-0.0050505262499999995
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure