Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCTCAGCAAGGGGTTTTTCTGTCTTTTTCCAAATGCTGGTGA
((((((((((((((((((.(((&)))))))).)))))).....................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173516
GeneSymbolPNLDC1
Binding site859,903
Score1.0
Seed1
Au0.544
Energy-19.8
Binding len44
Me-3.938
Phylopstem0.0635484725
Phylopflank-0.05415721750000001
Longest consecutive pairings8
Position of longest consecutive pairings36
Pairings in 3prime end7
PositionCDS
2D Structure