Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGCCGCCTGCAGA
((((((..(((((..((((((&))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173516
GeneSymbolPNLDC1
Binding site122,140
Score0.923
Seed0
Au0.382
Energy-20.8
Binding len18
Me-9.387
Phylopstem-0.4104314666666667
Phylopflank0.27863369875000005
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure