Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCAAGTAATTCTCCCACCTTAGGCCTCCGAGTAGCTGGGAC
((.(((((((..(((((((((&)))))))))..........................))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173518
GeneSymbolMCMDC2
Binding site3790,3836
Score0.846
Seed0
Au0.471
Energy-21.0
Binding len46
Me-11.667
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings37
Pairings in 3prime end8
Position3UTR
2D Structure