Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCTGGAGGAAATAAATCAGGAAAGGGGAACAGA
..(((.(((((((((((((...&))))................)))))))))..))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173521
GeneSymbolSHOC1
Binding site1830,1865
Score0.923
Seed0
Au0.618
Energy-18.5
Binding len35
Me-6.858
Phylopstem0.47830827586206887
Phylopflank1.2446551000000001
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end5
PositionCDS
2D Structure