Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAGACATACTTCAGCTGCT
..(((((((.((((((..((.&))..))).))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173521
GeneSymbolSHOC1
Binding site2763,2783
Score0.938
Seed1
Au0.618
Energy-19.7
Binding len20
Me-6.2
Phylopstem-0.27038971428571423
Phylopflank0.36690631799999995
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure