Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTACAATATGGTGCACAGCAGACTGCAT
.(((((((((.((((((((..&))))))))..........)))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173521
GeneSymbolSHOC1
Binding site4055,4084
Score1.0
Seed1
Au0.603
Energy-19.0
Binding len29
Me-6.618
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings21
Pairings in 3prime end6
PositionCDS
2D Structure