Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTTAACATGCAGCTTGGACACAGCAT
.((((((((((((((.((((.&)))).)))).)))))))........))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173521
GeneSymbolSHOC1
Binding site2141,2170
Score0.846
Seed1
Au0.603
Energy-18.7
Binding len29
Me-4.026
Phylopstem0.4955594617391304
Phylopflank0.9201805919999999
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end6
PositionCDS
2D Structure