Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGGAAAGACTCCAGCTGTAAA
(((((((((.((((....(((&))).....)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173521
GeneSymbolSHOC1
Binding site3697,3720
Score0.923
Seed1
Au0.603
Energy-18.2
Binding len23
Me-6.149
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure