Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTGGCCCCCACATCAGCACCTGCTGATACAACTGAAGCTGCT
..((((((.((((((((((((&.)))).....)))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173525
GeneSymbolC11orf42
Binding site760,806
Score0.897
Seed1
Au0.368
Energy-23.6
Binding len26
Me-6.013
Phylopstem0.7042300882352942
Phylopflank0.71292097025
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end8
PositionCDS
2D Structure