Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACAGCCACTGCTGCC
..(((((.(.(((((((....&))))))).).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173533
GeneSymbolTDRD5
Binding site3160,3176
Score0.846
Seed0
Au0.456
Energy-20.0
Binding len16
Me-8.513
Phylopstem-0.42461942857142854
Phylopflank-0.8971815937500001
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end4
PositionCDS
2D Structure