Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCGTGTCCCAGGG
.(((((...((.(((((((...&))))))))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_173535
GeneSymbolCLEC4F
Binding site1562,1578
Score0.846
Seed0
Au0.382
Energy-16.7
Binding len16
Me-12.054
Phylopstem1.4028024285714285
Phylopflank1.12715745625
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end5
PositionCDS
2D Structure