Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGTTGAAAGGCAGCACAGTGGTTGCAAA
((((((((((((((((.....&.))))).).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173538
GeneSymbolCNBD1
Binding site636,668
Score0.862
Seed1
Au0.574
Energy-18.5
Binding len20
Me-3.938
Phylopstem0.6484001666666666
Phylopflank0.8875632975
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure