Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAGCGGCCTGCTGCAC
.((((((.((.((((.((((.&)))))))).))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173542
GeneSymbolPLBD2
Binding site1710,1730
Score0.923
Seed1
Au0.353
Energy-23.2
Binding len20
Me-9.165
Phylopstem0.052047333333333334
Phylopflank0.40451563749999997
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end6
PositionCDS
2D Structure