Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCGGGCTGGTGCAGCTGCGGT
(((((((((((.(.((..(((&)))...)).).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173546
GeneSymbolKLHDC8B
Binding site423,446
Score0.846
Seed1
Au0.309
Energy-22.5
Binding len23
Me-8.141
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure