Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTAAAATTGTATGTCAGGC
.(((((((((((((........&.))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_173550
GeneSymbolCCDC171
Binding site5308,5329
Score1.0
Seed1
Au0.5
Energy-19.9
Binding len15
Me-4.762
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure