Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CAGGAAGGAGCTGAGTT
.(((((((((((((((......&)))))))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173550
GeneSymbolCCDC171
Binding site5428,5445
Score1.0
Seed1
Au0.632
Energy-22.1
Binding len17
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings5
Pairings in 3prime end2
Position3UTR
2D Structure