Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTAGCCCAGGCTTTGTCAACTGTAGAGGAAAAGAAGCAAGAGGAAGCCAA
...(((((((((((((((((((&)))).)))))).............................))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173550
GeneSymbolCCDC171
Binding site2683,2734
Score0.846
Seed0
Au0.647
Energy-21.6
Binding len51
Me-6.515
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings40
Pairings in 3prime end8
PositionCDS
2D Structure