Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCTAGAAAGGAAGCTGGTC
.((((((((((((((.(((((.&))))))))))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173550
GeneSymbolCCDC171
Binding site639,660
Score1.0
Seed1
Au0.544
Energy-21.6
Binding len21
Me-4.026
Phylopstem0.0405039066666666
Phylopflank0.09713844500000002
Longest consecutive pairings13
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure