Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTGCCTTGCGGGGAGGGGGCTCCTGGGCCATGGGACTTCCAGTGC
((((((((((((((((((((((&))))))...))))))))))....................)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173558
GeneSymbolFGD2
Binding site2340,2386
Score0.923
Seed1
Au0.353
Energy-23.2
Binding len46
Me-3.938
Phylopstem-0.1460614444444444
Phylopflank-0.08388164
Longest consecutive pairings10
Position of longest consecutive pairings27
Pairings in 3prime end8
Position3UTR
2D Structure